Late in Sequence 03, you unlock Fleet Missions. They’re started in your ship’s captain’s cabin or in forts and headquarters that you’ve taken over. Approach the map that is marked in these areas and use them to go into the Fleet Mission menu.
During these, Shay sends the ships that he’s captured out to earn money, collect rare items, and help the British win the war on the seas. You establish a fleet by boarding other vessels and choosing to “Add Them to Your Fleet” after you win the battle. At first, you can only have a few of these in your fleet, but grabbing more gives you the option to expand your docks. This costs more and more money as you get additional ships, but the cost of expanding your docks is reasonable, rather than something you have to save up money for.
Having a larger fleet allows you to send more ships on missions simultaneously. Although you can only expand your number of missions (and thus, trade routes) by completing the most advanced mission available, you’re still able to deploy ships along existing unlocked routes to get bonus cash and resources.
There are several types of cargo that your ships can carry: food, arms, troops, medical supplies, and spies. You sometimes gain these from working on your trade routes, but other times you have to gather a specific amount ahead of time and deliver them to your destination. All of this is shown in the Fleet Mission screen. If you are lacking on any resources, go through your trade routes and see which ones provide the resources that you need. Have your spare ships working constantly on these easy routes to keep your stockpile of goods as high aspossible.
Once you’ve directed a ship to start a mission, a timer starts before you find out if a fleet mission has been successful. Go ahead and leave the Fleet Mission screen while the timer counts down; it’ll keep going and let you continue with your own business.
If you don’t have a ship that is strong enough to succeed in the mission, go after the trade routes in that area and fight smaller battles to clear away the enemies. This raises the chance of success dramatically and is very useful when you don’t have heavier ships (like men-o’-wars) to power through the missions.
Smaller, faster vessels have shorter timers. It’s usually worthwhile to send the smallest ship that has enough cargo space to get the job done. Use your heavier vessels for clearing the way, and send your smaller ships to get the mission done quickly and efficiently.
All Fleet Missions can be replayed
for additional cash. The amounts aren’t very high once you’re in the late game, but earlier on they’re a solid way to give yourself more income. Send multiple ships at once to clear out multiple missions that have already been unlocked. You won’t get new achievements or challenges for doing this (it’s all about the money).
If you encounter a trade route that is too tough to take out with the ships you have at your disposal, just back out. Every time you go into the Trade Route screen, the battle is randomized. A fight against three men-o’-wars might become two brigs and a frigate the next time you come in.

|
Fleet Mission |
Rewards |
Next Mission |
| Louisiana | 720 Pounds, Aveline Figurehead | Florida |
| Florida | 371 Pounds, Spanish Conquistador Helmet | Savannah |
| Savannah | 319 Pounds, Savannah Collectible | Barbados |
| Barbados Mission | 889 Pounds, Admiral Lion’s Pistols | Cap-Français |
| Cap-Français | 618 Pounds, Engraving of François Mackandal | Le Havre |
| Le Havre | 1,473 Pounds, Ruinous Reinette | Brest |
| Brest | 1,426 Pounds, Admiral Lion Wheel | Havana |
| Havana | 510 Pounds, Cuban Salvage | Carrickfergus |
| Carrickfergus | 1,298 Pounds, Irish Flag | Lagos |
| Lagos | 1,392 Pounds, Statue of São Gonçalo | Gibraltar |
| Gibraltar | 1,514 Pounds, Spanish Sword | Belem |
| Belem | 1,383 Pounds, Dead End | Rio de Janeiro |
| Rio de Janeiro | 2,013 Pounds, British Lion Sails | Cartagena (Story Progress Required) |
| Cartagena | 1,668 Pounds, Mediterranean Defense | Buenos Aires |
| Buenos Aires | 2,725 Pounds, Relic of Pedro de Mendoza | Goree Island |
| Goree Island | 1,626 Pounds, A Door of No Return | Saint-Louis |
| Saint-Louis | 1,538 Pounds, African Mask | Luanda |
| Luanda | 2,421 Pounds, Golden African Wheel | Copenhagen |
| Copenhagen | 1,726 Pounds, 18th-Century Mariner’s Compass | Gothenburg |
| Gothenburg | 1,489 Pounds, Admiral Lion Sword and Dagger | Stockholm |
| Stockholm | 1,517 Pounds, the Swedish Levant Company | Sardinia (Story Progress Required) |
| Sardinia | 2,356 Pounds, British Lion Figurehead | Malta |
| Malta | 1,278 Pounds, the Hospitaller’s Plea | Crete |
| Crete | 1,074 Pounds, Dancing Cretan Bull Mosaic | Isle de France |
| Isle de France | 3,749 Pounds, Gilded French Sails | Mozambique |
| Mozambique | 3,719 Pounds, the Omani Arabs | Mombasa |
| Mombasa | 4,229 Pounds, Portrait of Ahmad bin Said al-Busaidi (Sultan of Oman) | Calcutta |
| Calcutta | 4,646 Pounds, the Kingdom of Mysore | Yanaon |
| Yanaon | 3,399 Pounds, India Flintlock Pistols | Puducherry |
| Puducherry | 4,438 Pounds, Mysorean Rocket | Malacca |
| Malacca | 1,942 Pounds, Admiral Outfit | Java |
| Java | 3,767 Pounds, Javanese Gong | Manila |
| Manila | 4,333 Pounds, the Manila Galleons | Completion of Fleet Mission |
Abstergo Challenges
These challenges are an in-game achievement system. They track various activities that you do both in and out of battle, and they’ll reward you with special cheat abilities. The cheats can’t be used to make new progress, but they’re a fun option when you’d like to goof around.
There are 70 challenges in all, and you get a reward for every five that you complete. These are available from the beginning of the game, so try them whenever you’re interested.
Cheat Rewards
|
Cheat Name |
Challenges Required |
Effect |
| Immortal | 5 | You and your ship become immune to damage. |
| Cornucopia | 10 | Unlimited ammunition for Shay and the Morrigan. |
| Fairy Gunpowder | 15 | Weapons don’t require reloading. |
| Gray Men | 20 | Shay can’t be detected without directly attacking a target. |
| Master of the Wind | 25 | Wind is always at your back. |
| Burn Them! | 30 | Burning oil does increased damage. |
| Timeless | 35 | Locks the day/night cycle. |
| Lord of Thunder | 40 | Open conflict always initiates a thunderstorm, and kills will generate peals of thunder. |
| Big Mouth | 45 | Shay uses cheesy lines to amaze and entertain. |
| Hunted | 50 | You have a constant Wanted level. |
| Endurance Challenge | 55 | Shay and the Morrigan stop regenerating health. |
| Wanted | 60 | You are always detected by guards. |
| Veterans | 65 | All guards have increased damage and health by 200%. |
| Cailleach’s Gift | 70 | Shay weapons are covered in frost and his crew is transformed to frozen skeletons. |
Lone Wolf
Synchronize five Viewpoints
Perform 10 assassinations
Perform 10 air assassinations
Kill 10 enemies from hiding places
Complete three Assassin interceptions
Climb for a total of 500 meters
Perform five double assassinations
Perform 10 escapes from open conflict by using blending or hiding
Dive into water from a height of 45 meters
Hang 5 enemies using Rope Darts
Have 10 enemies killed by another berserk enemy
Complete all Assassin Interceptions
Privateer
Purchase 3 boat upgrades
Sink a ship using the Puckle gun
Capture 3 ships
Plunder 6 warehouses
Capture 3 forts
Sink a ship by ramming it
Unlock 5 taverns
Own 5 different figureheads
Defeat 3 man-o’-war vessels
Plunder 3 warehouses without triggering an alarm bell
Complete 2 legendary battles
Sail a total distance of 120 nautical miles
Scout
Collect 10 Animus Fragments
Collect a Templar Map
Collect a piece of the Viking Armour
Collect 50 Animus Fragments
Visit 15 different locations
Collect all Templar Maps
Collect all pieces of the Viking Armour
Collect all 200 Animus Fragments
Synchronize all Viewpoints
Find all Cave Paintings
Trapper
Skin 5 animals
Kill a Canadian lynx with the hidden blade
Harpoon a sea animal
Pet 5 dogs
Skin 5 animals
Harpoon and kill 5 sea animals
Craft 5 hero upgrades
Kill a black wolf
Craft all hero upgrades
Skin each type of animal
Harpoon and kill each type of sea animal
Warrior
Kill 3 enemies with a grenade
Achieve a 3-enemy kill streak
Kill 5 stalkers
Kill 5 enemies with headshots
Kill 5 enemies affected by a Smoke Bomb within 10 seconds
Achieve a 5-enemy kill streak
Use every type of weapon to kill enemies
Kill 8 guards with grenades
Kill 30 enemies with headshots
Achieve a 7-enemy kill streak
Disarm and kill 3 agile guards with their own weapons
Financier
Pickpocket 200 pounds
Loot 10 bodies
Possess 5,000 pounds
Renovate a building
Free a trade route in the naval campaign
Complete all trading missions in the naval campaign
Renovate 5 buildings
Spend 70,000 pounds
Renovate all buildings
Possess 150,000 pounds
Unlock all destinations in the naval campaign
Performance
Get 25% of total synchronization
Get 50% of total synchronization
Get 100% of total synchronization